+ Original articles in refereed journals and books chapters

«Smartphone integration of artificial intelligence for automated plagiocephaly diagnosis»

Watt, Ayden, Lee, James, Toews, Matthew and Gilardino, Mirko S..”
Plastic and Reconstructive Surgery – Global Open 2023.

«Ultrasonic imaging using conditional generative adversarial networks»

Molinier, Nathan, Painchaud-April, Guillaume, Le Duff, Alain, Toews, Matthew and Bélanger, Pierre.”
Ultrasonics 2023.

«Efficient pairwise neuroimage analysis using the soft jaccard index and 3D keypoint sets»

Laurent Chauvin, Kuldeep Kumar, Christian Desrosiers, William Wells, Matthew Toews”
IEEE Transactions on Medical Imaging 2022.

«Deconvolution of ultrasonic signals using a convolutional neural network»

Arthur Chapon, Daniel Pereira, Matthew Toews, Pierre Belanger”
Ultrasonics 2021.

«Neuroimage signature from salient keypoints is highly specific to individuals and shared by close relatives»

Laurent Chauvin, Kuldeep Kumar, Christian Wachinger, Marc Vangel, Jacques de Guise, Christian Desrosiers, William Wells, Matthew Toews”
NeuroImage 2020.

«A comparison of thin-plate spline deformation and finite element modeling to compensate for brain shift during tumor resection»

Sarah Frisken, Ma Luo, Parikshit Juvekar, Adomas Bunevicius, Ines Machado, Prashin Unadkat, Melina M”
International Journal of Computer Assisted Radiology and Surgery Bertotti, Matt Toews, William M. Wells, Michael I. Miga, Alexandra J. Golby.2020.

«Keypoint transfer for fast whole-body segmentation»

Christian Wachinger, Matthew Toews, Georg Langs, William Wells, Polina Golland”
IEEE Transactions on Medical Imaging 2020.

«Novel radiomic features based on joint intensity matrices for predicting glioblastoma patient survival time»

Ahmad Chaddad, Paul Daniel, Christian Desrosiers, Matthew Toews, Bassam Abdulkarim”
IEEE Journal of Biomedical and Health Informatics 2019.

«Deep radiomic analysis based on modeling information flow in convolutional neural networks»

Ahmad Chaddad, Matthew Toews, Christian Desrosiers, Tamim Niazi”
IEEE Access 2019.

«Deformable MRI-Ultrasound registration using correlation-based attribute matching for brain shift correction: accuracy and generality in multi-site data»

Inês Machado, Matthew Toews, Elizabeth George, Prashin Unadkat, Walid Essayed, Jie Luo, Pedro Teodoro, Herculano Carvalho, Jorge Martins, Polina Golland, Steve Pieper, Sarah Frisken, Alexandra Golby, William Wells III, Yangming Ou”
NeuroImage 2019.

«Multi-modal brain fingerprinting: A manifold approximation based framework»

Kuldeep Kumar, Matthew Toews, Laurent Chauvin, Olivier Colliot, Christian Desrosiers”
NeuroImage 2018.

«Using the variogram for vector outlier screening: application to feature-based image registration»

Jie Luo, Sarah Frisken, Ines Machado, Mlaomlao Zhang, Steve Pieper, Polina Golland, Matthew Toews, Prashln Unadkat, Alireza Sedghi, Haoyln Zhou, Alireza Mehrtash, Frank Preiswerk, Cheng-Chleh Cheng, Alexandra Golby, Masashi Sugiyama, William M”
International Journal of Computer Assisted Radiology and Surgery III Wells.2018.

«Non-rigid registration of 3D ultrasound for neurosurgery using automatic feature detection and matching»

Inês Machado, Matthew Toews, Jie Luo, Pashin Unadkat, Walid Essayed, Elizabeth George, Pedro Teodoro, Herculano Carvalho, Jorge Martins, Polina Golland, Steve Pieper, Sarah Frisken, Alexandra Golby, William III Wells”
International Journal of Computer Assisted Radiology and Surgery 2018.

«Phantomless auto-calibration and online calibration assessment for a tracked freehand 2-D ultrasound probe»

Matthew Toews, M”
IEEE Transactions on Medical Imaging William Wells.2018.

«Multi-scale radiomic analysis of sub-cortical regions in MRI related to autism, gender and age»

Ahmad Chaddad, Christian Desrosiers, Matthew Toews”
Scientific Reports 2017.

«Predicting survival time of lung cancer patients using radiomic analysis»

Ahmad Chaddad, Christian Desrosiers, Matthew Toews, Bassam Abdulkarim”
Oncotarget 2017.

«Classifications of multispectral colorectal cancer tissues using convolution neural network»

Hawraa Haj-Hassan, Ahmad Chaddad, Youssef Harkouss, Christian Desrosiers, Matthew Toews, Camel Tanougast”
Journal of Pathology Informatics 2017.

«Fiberprint: A subject fingerprint based on sparse code pooling for white matter fiber analysis»

Kuldeep Kumar, Christian Desrosiers, Kaleem Siddiqi, Olivier Colliot, Matthew Toews”
NeuroImage 2017.

«Hybrid MRI-Ultrasound acquisitions, and scannerless real-time imaging»

Frank Preiswerk, Matthew Toews, Cheng-Chieh Cheng, Jr-yuan George Chiou, Chang-Sheng Mei, Lena F. W. Scott Hoge, Benjamin M. Schwartz, Lawrence P. Panych, Bruno Madore.”
Magnetic Resonance in Medicine Schaefer 2017.

«Multi texture analysis of colorectal cancer continuum using multispectral imagery»

Ahmad Chaddad, Christian Desrosiers, Ahmed Bouridane, Matthew Toews, Lama Hassan, Camel Tanougast”
PLoS ONE 2016.

«Robust initialization of active shape models for lung segmentation in CT scans: a feature-based atlas approach»

G. Gill, M. Toews, R. R. Beichel”
International Journal of Biomed Imaging 2014.

«Efficient and robust model-to-image alignment using 3D scale-invariant features»

Matthew Toews, William M Wells III”
Medical Image Analysis 2013.

«Feature-based morphometry: discovering group-related anatomical patterns»

Matthew Toews, William M. Wells III, D. Louis Collins, Tal Arbel”
NeuroImage 2010.

«Detection, localization, and sex classification of faces from arbitrary viewpoints and under occlusion»

M. Toews, T. Arbel”
IEEE Transactions on Pattern Analysis and Machine Intelligence 2009.

«A statistical parts-based model of anatomical variability»

M Toews, T. Arbel”IEEE Transactions on Medical Imaging 2007.

«Detecting defects in materials using deep convolutional neural networks»

Boyadjian, Quentin and Vanderesse, Nicolas and Toews, Matthew and Bocher, Philippe”

Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) 2020.

«Large Scale Indexing of Generic Medical Image Data using Unbiased Shallow Keypoints and Deep CNN Features»

Chauvin, L. and Lazreg, M. Ben and Carluer, J. B. and Wells, W. and Toews, M.”

arXiv preprint arXiv łdots 2020.

«Accelerating Fluid Development on a Chip for Renewable Energy»

Zhong, Junjie and Soni, Vikram and Saber, Sepehr and Riordon, Jason and Schwarz, Bailey and Toews, Matthew and Sinton, David”

Energy and Fuels 2020.

«Method for thermal profile control and energy recovery in geothermal wells»

Cairns, P and Toews, M and Redfern, J”

US Patent App. 16/524,017 2020.

«Method for forming high efficiency geothermal wellbores»

Toews, M and Cairns, P and Andrews, P and …”

US Patent App. 16 łdots 2020.

«Deconvolution of Ultrasonic Signals Using a Convolutional Neural Network»

Chapon, Arthur and Pereira, Daniel and Toews, Matthew and Bélanger, Pierre”

Ultrasonics 2020.

«Analyzing Brain Morphology on the Bag-of-Features Manifold»

Chauvin, Laurent and Kumar, Kuldeep and Desrosiers, Christian and De Guise, Jacques and Wells, William and Toews, Matthew”

Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) 2019.

«Deformable MRI-Ultrasound registration using correlation-based attribute matching for brain shift correction: Accuracy and generality in multi-site data»

Machado, Inês and Toews, Matthew and George, Elizabeth and Unadkat, Prashin and Essayed, Walid and Luo, Jie and Teodoro, Pedro and Carvalho, Herculano and Martins, Jorge and Golland, Polina and Pieper, Steve and Frisken, Sarah and Golby, Alexandra and Wells, William and Ou, Yangming”

NeuroImage 2019.

«Fluid for use in power production environments»

Toews, M and Price, G and Cairns, P and Redfern, J and …”

US Patent App. 16 łdots 2019.

«Preliminary results comparing thin-plate splines with finite element methods for modeling brain deformation during neurosurgery using intraoperative ultrasound»

Frisken, Sarah F. and Luo, Ma and Machado, Ines and Unadkat, Prashin and Juvekar, Parikshit and Bunevicius, Adomas and Toews, Matthew and Wells, William M. and Miga, Michael I. and Golby, Alexandra J.”

Medical Imaging łdots 2019.

«Deep radiomic analysis based on modeling information flow in convolutional neural networks»

Chaddad, Ahmad and Toews, Matthew and Desrosiers, Christian and Niazi, Tamim”

IEEE Access 2019.

«Novel Radiomic Features Based on Joint Intensity Matrices for Predicting Glioblastoma Patient Survival Time»

Chaddad, Ahmad and Daniel, Paul and Desrosiers, Christian and Toews, Matthew and Abdulkarim, Bassam”

IEEE Journal of Biomedical and Health Informatics 2019.

«Deformable MRI-ultrasound registration via attribute matching and mutual-saliency weighting for image-guided neurosurgery»

Machado, Inês and Toews, Matthew and Luo, Jie and Unadkat, Prashin and Essayed, Walid and George, Elizabeth and Teodoro, Pedro and Carvalho, Herculano and Martins, Jorge and Golland, Polina and Pieper, Steve and Frisken, Sarah and Golby, Alexandra and Wells, William and Ou, Yangming”

Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) 2018.

«Fiberprint : Identifying subjects and twins using fiber geometry based brain fingerprint»

Kumar, Kuldeep and Desrosiers, Christian and Siddiqi, Kaleem and Colliot, Olivier and Toews, Matthew”

researchgate.net 2018.

«Phantomless Auto-Calibration and Online Calibration Assessment for a Tracked Freehand 2-D Ultrasound Probe»

Toews, Matthew and Wells, William M.”

IEEE Transactions on Medical Imaging 2018.

«Using the variogram for vector outlier screening: application to feature-based image registration»

Luo, Jie and Frisken, Sarah and Machado, Ines and Zhang, Miaomiao and Pieper, Steve and Golland, Polina and Toews, Matthew and Unadkat, Prashin and Sedghi, Alireza and Zhou, Haoyin and Mehrtash, Alireza and Preiswerk, Frank and Cheng, Cheng Chieh and Golby, Alexandra and Sugiyama, Masashi and Wells, William M.”

International Journal of Computer Assisted Radiology and Surgery 2018.

«Non-rigid registration of 3D ultrasound for neurosurgery using automatic feature detection and matching»

Machado, Inês and Toews, Matthew and Luo, Jie and Unadkat, Prashin and Essayed, Walid and George, Elizabeth and Teodoro, Pedro and Carvalho, Herculano and Martins, Jorge and Golland, Polina and Pieper, Steve and Frisken, Sarah and Golby, Alexandra and Wells, William”

International Journal of Computer Assisted Radiology and Surgery 2018.

«Diffusion orientation histograms (Doh) for diffusion weighted image analysis»

Chauvin, Laurent and Kumar, Kuldeep and Desrosiers, Christian and De Guise, Jacques and Toews, Matthew”

Mathematics and Visualization 2018.

«Multi-modal brain fingerprinting: A manifold approximation based framework»

Kumar, Kuldeep and Chauvin, Laurent and Toews, Matthew and Colliot, Olivier and Desrosiers, Christian”

bioRxiv 2017.

«Hybrid MRI-Ultrasound acquisitions, and scannerless real-time imaging»

Preiswerk, Frank and Toews, Matthew and Cheng, Cheng Chieh and Chiou, Jr yuan George and Mei, Chang Sheng and Schaefer, Lena F. and Hoge, W. Scott and Schwartz, Benjamin M. and Panych, Lawrence P. and Madore, Bruno”

Magnetic Resonance in Medicine 2017.

«L’empreinte cérébrale: une image des connexions du cerveau»

Kumar, K and Desrosiers, C and Siddiqi, K and Colliot, O and …”

Substance łdots 2017.

«Fiberprint: A subject fingerprint based on sparse code pooling for white matter fiber analysis»

Kumar, Kuldeep and Desrosiers, Christian and Siddiqi, Kaleem and Colliot, Olivier and Toews, Matthew”

NeuroImage 2017.

«Fiberprint: Human Brain Wiring Shows Unique Fingerprint»

Kumar, K and Desrosiers, C and Siddiqi, K and Colliot, O and …”

Substance łdots 2017.

«Local discriminative characterization of MRI for Alzheimer’s disease»

Chaddad, Ahmad and Desrosiers, Christian and Toews, Matthew”

Proceedings – International Symposium on Biomedical Imaging 2016.

«Method and apparatus for power generation»

Hunstable, Fred E”

US Patent App. 16/181,492 2016.

«Phenotypic characterization of glioblastoma identified through shape descriptors»

Chaddad, Ahmad and Desrosiers, Christian and Toews, Matthew”

Medical Imaging 2016: Computer-Aided Diagnosis 2016.

«GBM heterogeneity characterization by radiomic analysis of phenotype anatomical planes»

Chaddad, Ahmad and Desrosiers, Christian and Toews, Matthew”

Medical Imaging 2016: Image Processing 2016.

«Robust spatio-temporal registration of 4D cardiac ultrasound sequences»

Bersvendsen, Jørn and Toews, Matthew and Danudibroto, Adriyana and Wells, William M. and Urheim, Stig and Estépar, Raúl San José and Samset, Eigil”

Medical Imaging 2016: Ultrasonic Imaging and Tomography 2016.

«How are siblings similar? How similar are siblings? Large-scale imaging genetics using local image features»

Toews, Matthew and Wells, William M.”

Proceedings – International Symposium on Biomedical Imaging 2016.

«Keypoint transfer segmentation»

Wachinger, C. and Toews, M. and Langs, G. and Wells, W. and Golland, P.”

Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) 2015.

«Hybrid utrasound and MRI acquisitions for high-speed imaging of respiratory organ motion»

Preiswerk, Frank and Toews, Matthew and Hoge, W. Scott and Chiou, Jr Yuan George and Panych, Lawrence P. and Wells, William M. and Madore, Bruno”

Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) 2015.

«A feature-based approach to big data analysis of medical images»

Toews, Matthew and Wachinger, Christian and Estepar, Raul San Jose and Wells, William M.”

Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) 2015.

«Registration and Segmentation for Image-Guided Therapy»

Kapur, Tina and Egger, Jan and Jayender, Jagadeesan and Toews, Matthew and Wells, William M.”

Intraoperative Imaging and Image-Guided Therapy 2014.

«Detecting rapid organ motion using a hybrid MR-ultrasound setup and Bayesian data processing»

Toews, M and Mei, C S and Chu, R and Hoge, W S and …”

Proceedings of the łdots 2014.

«Inter-slice correspondence for 2D ultrasound-guided procedures»

Toews, Matthew and Golby, Alexandra J. and Wells, William M.”

Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) 2014.

«Shape analysis for brain structures»

Ng, Bernard and Toews, Matthew and Durrleman, Stanley and Shi, Yonggang”

Lecture Notes in Computational Vision and Biomechanics 2014.

«Optimization of Dual-Pathway Unbalanced Steady-State Sequences for Robust Temperature Imaging»

Panych, L P and Chu, R and Mei, C S and Wang, G and …”

Salt Lake City łdots 2013.

«Feature-based alignment of volumetric multi-modal images»

Toews, Matthew and Zöllei, Lilla and Wells, William M.”

Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) 2013.

«Efficient and robust model-to-image alignment using 3D scale-invariant features»

Toews, Matthew and Wells, William M.”

Medical Image Analysis 2013.

«Fiber feature map based landmark initialization for highly deformable DTI registration»

Gupta, Aditya and Toews, Matthew and Janardhana, Ravikiran and Rathi, Yogesh and Gilmore, John and Escolar, Maria and Styner, Martin”

Medical Imaging 2013: Image Processing 2013.

«An Automated Initialization System for Robust Model-Based Segmentation of Lungs in CT Data»

Gill, Gurman and Toews, Matthew and Beichel, Reinhard R”

Proceedings of the 5th International łdots 2013.

«Boosting MR Temporal Resolution using Rapid Ultrasound Measurements , for Motion-Tracking Purposes»

Toews, M and Mei, C S and Chu, R and Hoge, W S and …”

Proceedings of the łdots 2013.

«Strategy for simultaneous region-tracking and temperature-monitoring in the liver during free-breathing 1»

Madore, B and Toews, M and Mei, C S and Chu, R and Hoge, W S and …”

2012.

«Method of gas-cap air injection for thermal oil recovery»

Sanmiguel, J E and Toews, M A and Freeman, L W”

US Patent 8,176,980 2012.

«Feature-based developmental model of the infant brain in structural MRI»

Toews, Matthew and Wells, William M. and Zöllei, Lilla”

Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) 2012.

«Fluid storage tank assembly»

Toews, M and Houle, M and Garritty, N”

US Patent App. 13/302,932 2012.

«Suicide attempts versus nonsuicidal self-injury among individuals with anxiety disorders in a nationally representative sample»

Chartrand, Hayley and Sareen, Jitender and Toews, Matthew and Bolton, James M.”

Depression and Anxiety 2012.

«Exploring cortical folding pattern variability using local image features»

Rajalingham, Rishi and Toews, Matthew and Collins, D. Louis and Arbel, Tal”

Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) 2011.

«Feature-based morphometry: Discovering group-related anatomical patterns»

Toews, Matthew and Wells, William and Collins, D. Louis and Arbel, Tal”

NeuroImage 2010.

«Detection, localization, and sex classification of faces from arbitrary viewpoints and under occlusion»

Toews, Matthew and Arbel, Tal”

IEEE Transactions on Pattern Analysis and Machine Intelligence 2009.

«Parts-based appearance modeling of medical imagery»

Toews, Matthew and Arbel, Tal”

Computational Intelligence in Medical Imaging: Techniques and Applications 2009.

«Automatically learning cortical folding patterns»

Toews, Matthew and Collins, D. Louis and Arbel, Tal”

Proceedings – 2009 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, ISBI 2009 2009.

«Bayesian registration via local image regions: Information, selection and marginalization»

Toews, Matthew and Wells, William M.”

Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) 2009.

«A Probabilistic Model to Learn, Detect, Localize and Classify Patterns in Arbitrary Images»

Toews, Matthew”

2008.

«Practical considerations of reservoir heterogeneities on SAGD projects»

Baker, R. and Fong, C. and Li, T. and Bowes, C. and Toews, M.”

Society of Petroleum Engineers – International Thermal Operations and Heavy Oil Symposium, ITOHOS 2008 – “Heavy Oil: Integrating the Pieces” 2008.

«Introduction to Medical Image Segmentation»

Opencourseware, M I T”

Image Processing 2007.

«A statistical parts-based model of anatomical variability»

Toews, Matthew and Arbel, Tal”

IEEE Transactions on Medical Imaging 2007.

«Detecting, localizing and classifying visual traits from arbitrary viewpoints using probabilistic local feature modeling»

Toews, Matthew and Arbel, Tal”

Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) 2007.

«A statistical parts-based appearance model of inter-subject variability»

Toews, Matthew and Collins, D. Louis and Arbel, Tal”

Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) 2006.

«Maximum a posteriori local histogram estimation for image registration»

Toews, Matthew and Collins, D. Louis and Arbel, Tal”

Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) 2005.